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Description

collagen, type XIII, alpha 1

Location
INSDC coordinates

chromosome:VEGA61:CM000672.2:69801931:69964275:1

About this gene

This gene has 13 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
COL13A1-001OTTHUMT000000484683093717aaOTTHUMP00000019731
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44419Q5TAT6
COL13A1-002OTTHUMT000000484693027695aaOTTHUMP00000019732
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44424-
COL13A1-011OTTHUMT000003804582276645aaOTTHUMP00000227634
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44427-
COL13A1-014OTTHUMT000003804602061686aaOTTHUMP00000227636
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44425-
COL13A1-013OTTHUMT000003804592007668aaOTTHUMP00000227635
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44423-
COL13A1-015OTTHUMT000003804611833610aaOTTHUMP00000227637
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44428-
COL13A1-004OTTHUMT000000484712991683aaOTTHUMP00000019733
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
COL13A1-006OTTHUMT000000484731057247aaOTTHUMP00000019734
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL13A1-008OTTHUMT00000048475749174aaOTTHUMP00000194896
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL13A1-003OTTHUMT000000484702934582aaOTTHUMP00000227633
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
COL13A1-007OTTHUMT00000048478360No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
COL13A1-012OTTHUMT00000380462290No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
COL13A1-009OTTHUMT000000484762586No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays