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Updated annotation

The annotation for this gene is newer than that present in Ensembl.

Description

tropomyosin 1 (alpha)

Synonyms

Location
INSDC coordinates

chromosome:VEGA57:CM000677.2:63042632:63071915:1

Transcripts

This gene has 34 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
TPM1-018OTTHUMT000004170811717 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32263D9YZV5
TPM1-005OTTHUMT000004170911670 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32262-
TPM1-010OTTHUMT000004170901655 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58368-
TPM1-011OTTHUMT000004170951637 bp245 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32264-
TPM1-001OTTHUMT000002562201295 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10181-
TPM1-002OTTHUMT000004170831049 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45273P09493
TPM1-028OTTHUMT00000417089977 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58369-
TPM1-034OTTHUMT000004740183957 bp106 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-008OTTHUMT000004170871800 bp326 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-012OTTHUMT000004170961568 bp248 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-023OTTHUMT000004171061232 bp33 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-003OTTHUMT000004170921039 bp265 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-014OTTHUMT00000417099925 bp275 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-015OTTHUMT00000417100851 bp248 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-016OTTHUMT00000417101738 bp245 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-027OTTHUMT00000417093671 bp223 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-022OTTHUMT00000417102570 bp108 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YL42 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TPM1-019OTTHUMT00000417082485 bp70 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
TPM1-024OTTHUMT00000417103292 bp8 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TPM1-004OTTHUMT00000417086926 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
TPM1-017OTTHUMT000004171042687 bp92 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TPM1-009OTTHUMT000004170881525 bp157 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TPM1-013OTTHUMT000004170971399 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TPM1-033OTTHUMT00000417732673 bp68 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-020OTTHUMT00000417084582 bp40 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TPM1-029OTTHUMT00000417094573 bp142 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TPM1-007OTTHUMT000004170802855 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-006OTTHUMT000004170851031 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-032OTTHUMT00000417733673 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-030OTTHUMT00000417731658 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-021OTTHUMT00000417098653 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-026OTTHUMT00000417107537 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-025OTTHUMT00000417105525 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
TPM1-031OTTHUMT00000417734437 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays