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Updated annotation available

There is updated annotation for this gene available here.

Description

CCR4-NOT transcription complex, subunit 1

Synonyms

AD-005, CDC39, KIAA1007, NOT1H, AD-005, CDC39, KIAA1007, NOT1H

Location
INSDC coordinates

chromosome:VEGA61:CM000678.2:58519951:58629886:1

About this gene

This gene has 23 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
CNOT1-001OTTHUMT0000025738584712376aaOTTHUMP00000164723
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10799A5YKK6
CNOT1-003OTTHUMT0000042224476602371aaOTTHUMP00000250141
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58468-
CNOT1-002OTTHUMT0000042224249991551aaOTTHUMP00000250140
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45501-
CNOT1-019OTTHUMT000004223711317439aaOTTHUMP00000250169
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BMZ2 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
CNOT1-023OTTHUMT00000422465831277aaOTTHUMP00000250222
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
CNOT1-016OTTHUMT00000422374722241aaOTTHUMP00000250172
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
CNOT1-010OTTHUMT0000042227758262aaOTTHUMP00000250148
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CNOT1-022OTTHUMT00000422382578193aaOTTHUMP00000250174
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
CNOT1-017OTTHUMT00000422373553185aaOTTHUMP00000250171
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
CNOT1-008OTTHUMT0000042226653525aaOTTHUMP00000250145
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CNOT1-007OTTHUMT0000042226538526aaOTTHUMP00000250144
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CNOT1-021OTTHUMT000004223801425No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
CNOT1-005OTTHUMT0000042226478302150aaOTTHUMP00000250143
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
CNOT1-020OTTHUMT0000042237673996aaOTTHUMP00000250173
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
CNOT1-018OTTHUMT0000042237256768aaOTTHUMP00000250170
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
CNOT1-015OTTHUMT00000422375906No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
CNOT1-009OTTHUMT00000422279496No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
CNOT1-006OTTHUMT00000422267304No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
CNOT1-004OTTHUMT000004222632280No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
CNOT1-011OTTHUMT00000422278599No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
CNOT1-012OTTHUMT00000422276551No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
CNOT1-014OTTHUMT00000422274493No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
CNOT1-013OTTHUMT00000422275458No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

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