This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (4)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: CLSTN1 OTTHUMG00000001451

.

Description

calsyntenin 1

Synonyms

CSTN1, KIAA0911, CDHR12

Location

Chromosome 1: 9,729,026-9,824,526 reverse strand.

VEGA68:CM000663.2

About this gene

This gene has 5 transcripts (splice variants), 4 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CLSTN1-001	OTTHUMT00000004239.1	5221	981aa	OTTHUMP00000001597	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30580	O94985
CLSTN1-002	OTTHUMT00000004240.1	4647	971aa	OTTHUMP00000001598	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS105	-
CLSTN1-003	OTTHUMT00000004241.1	3829	782aa	OTTHUMP00000001599	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5SR54	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CLSTN1-006	OTTHUMT00000004244.1	2169	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CLSTN1-005	OTTHUMT00000004243.1	563	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

.

Summary

.

.

Gene-based displays