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Updated annotation available

There is updated annotation for this gene available here.

Description

TAR DNA binding protein

Synonyms

TDP-43, ALS10

Location

Chromosome 1: 11,012,344-11,026,420 forward strand.

VEGA65:CM000663.2

About this gene

This gene has 30 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
TARDBP-001OTTHUMT00000006063.25367414aaOTTHUMP00000002171
 
Protein coding
CCDS122Q13148
TARDBP-003OTTHUMT00000006065.11835295aaOTTHUMP00000002173
 
Protein coding
-B1AKP7
TARDBP-012OTTHUMT00000473364.11008304aaOTTHUMP00000274553
 
Protein coding
-A0A087WYY0
TARDBP-019OTTHUMT00000473367.2980212aaOTTHUMP00000274556
 
Protein coding
-A0A087WV68 CDS 5' incomplete
TARDBP-005OTTHUMT00000006067.4929275aaOTTHUMP00000262710
 
Protein coding
-K7EN94 CDS 3' incomplete
TARDBP-013OTTHUMT00000473365.1920301aaOTTHUMP00000274554
 
Protein coding
-A0A087X260
TARDBP-016OTTHUMT00000473363.2816243aaOTTHUMP00000274552
 
Protein coding
-A0A087WX29 CDS 3' incomplete
TARDBP-017OTTHUMT00000473366.1706200aaOTTHUMP00000274555
 
Protein coding
-A0A087WXQ5 CDS 5' incomplete
TARDBP-004OTTHUMT00000006066.4701201aaOTTHUMP00000262709
 
Protein coding
-K7EJM5 CDS 3' incomplete
TARDBP-022OTTHUMT00000473384.1563127aaOTTHUMP00000274561
 
Protein coding
-A0A087WZC9 CDS 5' incomplete
TARDBP-010OTTHUMT00000473359.11467No protein-
 
Artifact
--
TARDBP-030OTTHUMT00000473408.11250No protein-
 
Artifact
--
TARDBP-029OTTHUMT00000473407.1782No protein-
 
Artifact
--
TARDBP-002OTTHUMT00000006064.31946298aaOTTHUMP00000002172
 
Nonsense mediated decay
-G3V162
TARDBP-011OTTHUMT00000473361.1138884aaOTTHUMP00000274551
 
Nonsense mediated decay
--
TARDBP-006OTTHUMT00000006068.3100180aaOTTHUMP00000262711
 
Nonsense mediated decay
--
TARDBP-025OTTHUMT00000473395.199235aaOTTHUMP00000274567
 
Nonsense mediated decay
--CDS 5' incomplete
TARDBP-020OTTHUMT00000473369.1739175aaOTTHUMP00000274557
 
Nonsense mediated decay
-A0A087WXV3 CDS 5' incomplete
TARDBP-021OTTHUMT00000473383.1706149aaOTTHUMP00000274560
 
Nonsense mediated decay
-A0A087WX67 CDS 5' incomplete
TARDBP-008OTTHUMT00000006070.269216aaOTTHUMP00000262713
 
Nonsense mediated decay
--CDS 5' incomplete
TARDBP-018OTTHUMT00000473370.1682138aaOTTHUMP00000274558
 
Nonsense mediated decay
-A0A087WW61 CDS 5' incomplete
TARDBP-024OTTHUMT00000473394.1657115aaOTTHUMP00000274566
 
Nonsense mediated decay
--CDS 5' incomplete
TARDBP-023OTTHUMT00000473385.151578aaOTTHUMP00000274562
 
Nonsense mediated decay
-A0A087WZM1 CDS 5' incomplete
TARDBP-007OTTHUMT00000006069.540965aaOTTHUMP00000262712
 
Nonsense mediated decay
--CDS 5' incomplete
TARDBP-026OTTHUMT00000473396.2929No protein-
 
Processed transcript
--
TARDBP-009OTTHUMT00000006071.2790No protein-
 
Processed transcript
--
TARDBP-014OTTHUMT00000473362.1584No protein-
 
Processed transcript
--
TARDBP-028OTTHUMT00000473399.1434No protein-
 
Processed transcript
--
TARDBP-027OTTHUMT00000473397.1379No protein-
 
Processed transcript
--
TARDBP-015OTTHUMT00000473368.1584No protein-
 
Retained intron
--

Gene-based displays