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Updated annotation available

There is updated annotation for this gene available here.

Description

TAR DNA binding protein

Synonyms

ALS10, TDP-43, ALS10, TDP-43

Location
INSDC coordinates

chromosome:VEGA61:CM000663.2:11012344:11026420:1

About this gene

This gene has 30 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
TARDBP-001OTTHUMT000000060635367414aaOTTHUMP00000002171
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS122Q13148
TARDBP-003OTTHUMT000000060651835295aaOTTHUMP00000002173
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKP7
TARDBP-012OTTHUMT000004733641008304aaOTTHUMP00000274553
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WYY0
TARDBP-019OTTHUMT00000473367980212aaOTTHUMP00000274556
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WV68 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-005OTTHUMT00000006067929276aaOTTHUMP00000262710
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EN94 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TARDBP-013OTTHUMT00000473365920301aaOTTHUMP00000274554
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087X260
TARDBP-016OTTHUMT00000473363816243aaOTTHUMP00000274552
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WX29 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TARDBP-017OTTHUMT00000473366706200aaOTTHUMP00000274555
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WXQ5 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-004OTTHUMT00000006066701201aaOTTHUMP00000262709
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EJM5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TARDBP-022OTTHUMT00000473384563127aaOTTHUMP00000274561
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WZC9 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-010OTTHUMT000004733591467No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
TARDBP-030OTTHUMT000004734081250No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
TARDBP-029OTTHUMT00000473407782No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
TARDBP-002OTTHUMT000000060641946298aaOTTHUMP00000002172
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V162
TARDBP-011OTTHUMT00000473361138884aaOTTHUMP00000274551
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TARDBP-006OTTHUMT00000006068100180aaOTTHUMP00000262711
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
TARDBP-025OTTHUMT0000047339599235aaOTTHUMP00000274567
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-020OTTHUMT00000473369739175aaOTTHUMP00000274557
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A0A087WXV3 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-021OTTHUMT00000473383706149aaOTTHUMP00000274560
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A0A087WX67 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-008OTTHUMT0000000607069216aaOTTHUMP00000262713
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-018OTTHUMT00000473370682138aaOTTHUMP00000274558
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A0A087WW61 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-024OTTHUMT00000473394657115aaOTTHUMP00000274566
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-023OTTHUMT0000047338551578aaOTTHUMP00000274562
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A0A087WZM1 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-007OTTHUMT0000000606940965aaOTTHUMP00000262712
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TARDBP-026OTTHUMT00000473396929No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
TARDBP-009OTTHUMT00000006071790No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
TARDBP-014OTTHUMT00000473362584No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
TARDBP-028OTTHUMT00000473399434No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
TARDBP-027OTTHUMT00000473397379No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
TARDBP-015OTTHUMT00000473368584No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays