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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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- Orthologues
- Alt. alleles
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Gene: VCL OTTHUMG00000018498

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Description

vinculin

Location

Chromosome 10: 73,995,193-74,121,363 forward strand.

VEGA68:CM000672.2

About this gene

This gene has 7 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VCL-001	OTTHUMT00000048751.2	6489	1066aa	OTTHUMP00000019861	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7340	A0A024QZN4
VCL-002	OTTHUMT00000048752.3	5490	1134aa	OTTHUMP00000019862	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7341	Q5JQ13
VCL-006	OTTHUMT00000478981.1	3307	57aa	OTTHUMP00000277823	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A096LPE1
VCL-007	OTTHUMT00000478980.1	7995	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VCL-003	OTTHUMT00000048753.2	727	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VCL-005	OTTHUMT00000048755.1	268	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VCL-004	OTTHUMT00000048754.1	556	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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