Description
lymphocyte antigen 9
Synonyms
mLY9, SLAMF3, CD229, hly9
Location
Chromosome 1: 160,796,074-160,828,261 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 12 transcripts (splice variants), 5 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LY9-003 | OTTHUMT00000060459.3 | 2485 | 641aa | OTTHUMP00000025673 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65695 | - | |
| LY9-001 | OTTHUMT00000060457.3 | 2443 | 655aa | OTTHUMP00000025671 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS30916 | Q9HBG7 | |
| LY9-002 | OTTHUMT00000060458.4 | 2213 | 565aa | OTTHUMP00000025672 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65696 | Q5VYH9 | |
| LY9-005 | OTTHUMT00000060461.1 | 1364 | 193aa | OTTHUMP00000025675 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS30917 | - | |
| LY9-004 | OTTHUMT00000060460.2 | 1463 | 341aa | OTTHUMP00000025674 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5VYI1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LY9-007 | OTTHUMT00000060463.2 | 1841 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LY9-008 | OTTHUMT00000071438.2 | 847 | 61aa | OTTHUMP00000273979 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LY9-011 | OTTHUMT00000071441.2 | 801 | 71aa | OTTHUMP00000272097 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LY9-009 | OTTHUMT00000071439.1 | 1056 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LY9-012 | OTTHUMT00000071442.1 | 940 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LY9-010 | OTTHUMT00000071440.1 | 705 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LY9-006 | OTTHUMT00000060462.2 | 5083 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
