Description
laminin, alpha 5
Location
Chromosome 20: 62,307,955-62,367,312 reverse strand.
VEGA68:CM000682.2
About this gene
This gene has 14 transcripts (splice variants), 14 orthologues and 12 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LAMA5-001 | OTTHUMT00000080014.3 | 11426 | 3695aa | OTTHUMP00000031475 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33502 | O15230 | |
| LAMA5-004 | OTTHUMT00000080017.4 | 723 | 241aa | OTTHUMP00000275405 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| LAMA5-007 | OTTHUMT00000349806.1 | 579 | 38aa | OTTHUMP00000212537 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LAMA5-003 | OTTHUMT00000080016.2 | 1674 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LAMA5-013 | OTTHUMT00000349812.1 | 894 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LAMA5-008 | OTTHUMT00000349807.1 | 579 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LAMA5-005 | OTTHUMT00000080018.3 | 3160 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-014 | OTTHUMT00000349813.1 | 780 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-006 | OTTHUMT00000080019.2 | 728 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-002 | OTTHUMT00000080015.1 | 637 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-011 | OTTHUMT00000349810.1 | 585 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-010 | OTTHUMT00000349809.1 | 487 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-009 | OTTHUMT00000349808.1 | 386 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LAMA5-012 | OTTHUMT00000349811.1 | 325 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
