Description
solute carrier family 22 (organic cation/carnitine transporter), member 5
Synonyms
OCTN2, SCD
Location
Chromosome 5: 132,369,752-132,395,614 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SLC22A5-001 | OTTHUMT00000132631.1 | 3237 | 557aa | OTTHUMP00000065961 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4154 | O76082 | |
| SLC22A5-004 | OTTHUMT00000148100.12 | 720 | 240aa | OTTHUMP00000195975 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BZC0 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SLC22A5-005 | OTTHUMT00000148101.3 | 998 | 37aa | OTTHUMP00000199801 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SLC22A5-002 | OTTHUMT00000132632.3 | 852 | 136aa | OTTHUMP00000198268 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C1R8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SLC22A5-008 | OTTHUMT00000339918.2 | 850 | 141aa | OTTHUMP00000207941 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WCC9 | |
| SLC22A5-007 | OTTHUMT00000315757.1 | 561 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC22A5-006 | OTTHUMT00000148102.3 | 10435 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC22A5-003 | OTTHUMT00000132633.2 | 3693 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
