Description
histone deacetylase 3
Synonyms
HD3, RPD3-2, RPD3
Location
Chromosome 5: 141,620,876-141,636,870 reverse strand.
VEGA68:CM000667.2
About this gene
This gene has 16 transcripts (splice variants), 6 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HDAC3-001 | OTTHUMT00000251824.2 | 1959 | 428aa | OTTHUMP00000160029 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4264 | O15379 | |
| HDAC3-016 | OTTHUMT00000375279.2 | 699 | 218aa | OTTHUMP00000224781 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ESJ6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HDAC3-015 | OTTHUMT00000375280.1 | 736 | 53aa | OTTHUMP00000224782 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EW19 | |
| HDAC3-013 | OTTHUMT00000318609.1 | 829 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HDAC3-012 | OTTHUMT00000318608.1 | 524 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HDAC3-014 | OTTHUMT00000318610.2 | 1952 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-002 | OTTHUMT00000318598.1 | 830 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-003 | OTTHUMT00000318599.1 | 797 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-007 | OTTHUMT00000318603.1 | 782 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-011 | OTTHUMT00000318607.1 | 777 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-009 | OTTHUMT00000318605.1 | 711 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-005 | OTTHUMT00000318601.1 | 663 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-006 | OTTHUMT00000318602.1 | 605 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-004 | OTTHUMT00000318600.1 | 529 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-008 | OTTHUMT00000318604.1 | 422 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC3-010 | OTTHUMT00000318606.1 | 297 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
