HumanVega Home

Updated annotation available

There is updated annotation for this gene available here.

Description

Vac14 homolog (S. cerevisiae)

Synonyms

ArPIKfyve, FLJ10305, ArPIKfyve, FLJ10305

Location
INSDC coordinates

chromosome:VEGA61:CM000678.2:70687439:70801161:1

About this gene

This gene has 13 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
VAC14-001OTTHUMT000002689733099782aaOTTHUMP00000174908
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10896Q08AM6
VAC14-005OTTHUMT000004349342161214aaOTTHUMP00000255660
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
VAC14-010OTTHUMT00000434937780260aaOTTHUMP00000255662
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BQD9 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
VAC14-012OTTHUMT0000043493170217aaOTTHUMP00000259265
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
VAC14-004OTTHUMT000004349352528No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
VAC14-009OTTHUMT00000434940554185aaOTTHUMP00000274876
 
Non stop decay
-A0A087WT26 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
VAC14-003OTTHUMT00000434933294540aaOTTHUMP00000255659
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BN23
VAC14-002OTTHUMT000004349322151201aaOTTHUMP00000255658
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BUU8
VAC14-013OTTHUMT000004377893609No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
VAC14-008OTTHUMT00000434939432No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
VAC14-007OTTHUMT000004349411391No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
VAC14-006OTTHUMT00000434938892No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
VAC14-011OTTHUMT00000434936515No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays