Description
increased sodium tolerance 1 homolog (yeast)
Location
Chromosome 16: 71,845,996-71,931,199 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 26 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| IST1-001 | OTTHUMT00000269005.3 | 4843 | 366aa | OTTHUMP00000174931 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59272 | - | |
| IST1-002 | OTTHUMT00000269006.1 | 2356 | 360aa | OTTHUMP00000174932 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10905 | - | |
| IST1-010 | OTTHUMT00000399580.1 | 2255 | 335aa | OTTHUMP00000238707 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59273 | - | |
| IST1-004 | OTTHUMT00000399569.2 | 1962 | 366aa | OTTHUMP00000255328 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59272 | - | |
| IST1-003 | OTTHUMT00000399568.2 | 1500 | 366aa | OTTHUMP00000255327 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59272 | - | |
| IST1-009 | OTTHUMT00000399577.2 | 1125 | 218aa | OTTHUMP00000259275 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59274 | - | |
| IST1-012 | OTTHUMT00000399584.1 | 2031 | 289aa | OTTHUMP00000238709 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KR23 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| IST1-015 | OTTHUMT00000399578.3 | 908 | 253aa | OTTHUMP00000255334 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BUI0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-018 | OTTHUMT00000399571.2 | 894 | 253aa | OTTHUMP00000255330 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BUI0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-016 | OTTHUMT00000399579.3 | 674 | 206aa | OTTHUMP00000255335 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BMU1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-017 | OTTHUMT00000399581.3 | 542 | 166aa | OTTHUMP00000255336 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BQF7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-014 | OTTHUMT00000399570.4 | 531 | 40aa | OTTHUMP00000255329 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BQ38 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-019 | OTTHUMT00000399572.2 | 521 | 141aa | OTTHUMP00000238704 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GXM3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-026 | OTTHUMT00000472114.2 | 503 | 105aa | OTTHUMP00000274203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BRE2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-013 | OTTHUMT00000399567.3 | 476 | 59aa | OTTHUMP00000255326 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BPP6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IST1-007 | OTTHUMT00000399575.2 | 1423 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| IST1-005 | OTTHUMT00000399574.2 | 1411 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| IST1-011 | OTTHUMT00000399582.2 | 1841 | 41aa | OTTHUMP00000238708 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PF00 | |
| IST1-025 | OTTHUMT00000399589.2 | 823 | 85aa | OTTHUMP00000259276 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QQP8 | |
| IST1-008 | OTTHUMT00000399576.3 | 1245 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IST1-021 | OTTHUMT00000399583.2 | 710 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IST1-006 | OTTHUMT00000399590.1 | 635 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IST1-023 | OTTHUMT00000399587.2 | 630 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IST1-020 | OTTHUMT00000434195.2 | 612 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IST1-022 | OTTHUMT00000399586.2 | 603 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IST1-024 | OTTHUMT00000399588.1 | 491 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
