Description
ubiquitin specific peptidase 42
Synonyms
FLJ12697
Location
Chromosome 7: 6,104,884-6,161,564 forward strand.
VEGA68:CM000669.2
About this gene
This gene has 8 transcripts (splice variants), 35 orthologues and 32 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| USP42-005 | OTTHUMT00000324262.3 | 5155 | 1316aa | OTTHUMP00000225049 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47535 | - | |
| USP42-006 | OTTHUMT00000324263.3 | 3611 | 1043aa | OTTHUMP00000200707 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JPC9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| USP42-008 | OTTHUMT00000375774.2 | 1490 | 475aa | OTTHUMP00000225050 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EWZ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| USP42-002 | OTTHUMT00000324259.2 | 2363 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| USP42-009 | OTTHUMT00000375775.1 | 5017 | 219aa | OTTHUMP00000225051 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E5RJP3 | |
| USP42-004 | OTTHUMT00000324261.2 | 1380 | 174aa | OTTHUMP00000200706 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4DP25 | |
| USP42-003 | OTTHUMT00000324260.1 | 520 | 98aa | OTTHUMP00000200705 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| USP42-007 | OTTHUMT00000324264.2 | 4286 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
