HumanVega Home
Description

breast cancer 1, early onset

Synonyms

BRCC1, PPP1R53, RNF53, BRCC1, PPP1R53, RNF53

Location
INSDC coordinates

chromosome:VEGA59:CM000679.2:43044295:43125483:1

About this gene

This gene has 29 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
BRCA1-001OTTHUMT0000034879870941863aaOTTHUMP00000212143
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11453P38398
BRCA1-005OTTHUMT0000034880259361884aaOTTHUMP00000212147
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11456-
BRCA1-006OTTHUMT0000034880357321816aaOTTHUMP00000212148
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11459E9PFZ0
BRCA1-007OTTHUMT000003488043273699aaOTTHUMP00000212149
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11455-
BRCA1-014OTTHUMT000003488112379759aaOTTHUMP00000212155
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11454A0A024R1V0
BRCA1-012OTTHUMT0000034880944971399aaOTTHUMP00000275457
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5YLB2
BRCA1-029OTTHUMT000004762753668721aaOTTHUMP00000275469
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R1Z8
BRCA1-011OTTHUMT000003488082108649aaOTTHUMP00000212153
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EWN5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-004OTTHUMT000003488011980622aaOTTHUMP00000212146
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PH68 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-009OTTHUMT000003488061972623aaOTTHUMP00000212151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EUM2 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-008OTTHUMT000003488051948572aaOTTHUMP00000212150
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZA85 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-013OTTHUMT000003488101612473aaOTTHUMP00000212154
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3B891 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-015OTTHUMT000003488121495498aaOTTHUMP00000212156
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8B8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-024OTTHUMT000004531141282354aaOTTHUMP00000265375
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EPC7
BRCA1-018OTTHUMT00000348815958319aaOTTHUMP00000212159
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8D8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-019OTTHUMT00000348816800266aaOTTHUMP00000212160
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y881 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-023OTTHUMT00000453113781173aaOTTHUMP00000265374
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C6YB45
BRCA1-003OTTHUMT00000348800779177aaOTTHUMP00000212145
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZW4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-017OTTHUMT00000348814769222aaOTTHUMP00000212158
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EQW4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-022OTTHUMT00000348819726242aaOTTHUMP00000212162
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y850 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-027OTTHUMT0000047552671823aaOTTHUMP00000275365
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G1UI37 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-025OTTHUMT0000045311556396aaOTTHUMP00000265376
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EJW3
BRCA1-016OTTHUMT0000034881345598aaOTTHUMP00000212157
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7ENB7 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-026OTTHUMT000004531161312437aaOTTHUMP00000265377
 
Non stop decay
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
BRCA1-010OTTHUMT00000348807569363aaOTTHUMP00000212152
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
BRCA1-002OTTHUMT00000348799158459aaOTTHUMP00000212144
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PC22
BRCA1-020OTTHUMT0000034881758263aaOTTHUMP00000212161
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
BRCA1-028OTTHUMT00000475525375No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
BRCA1-021OTTHUMT00000348818561No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays