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Description

breast cancer 1, early onset

Synonyms

BRCC1, PPP1R53, RNF53

Location
INSDC coordinates

chromosome:VEGA57:CM000679.2:43044295:43125483:1

Transcripts

This gene has 29 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
BRCA1-001OTTHUMT000003487987094 bp1863 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11453P38398
BRCA1-005OTTHUMT000003488025936 bp1884 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11456E9PFC7
BRCA1-006OTTHUMT000003488035732 bp1816 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11459E9PFZ0
BRCA1-007OTTHUMT000003488043273 bp699 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11455-
BRCA1-014OTTHUMT000003488112379 bp759 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11454A0A024R1V0
BRCA1-012OTTHUMT000003488094497 bp1399 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5YLB2
BRCA1-029OTTHUMT000004762753668 bp721 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R1Z8
BRCA1-011OTTHUMT000003488082108 bp649 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EWN5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-004OTTHUMT000003488011980 bp622 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PH68 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-009OTTHUMT000003488061972 bp623 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EUM2 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-008OTTHUMT000003488051948 bp572 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZA85 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-013OTTHUMT000003488101612 bp473 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3B891 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-015OTTHUMT000003488121495 bp498 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8B8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-024OTTHUMT000004531141282 bp354 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EPC7
BRCA1-018OTTHUMT00000348815958 bp319 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8D8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-019OTTHUMT00000348816800 bp266 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y881 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-023OTTHUMT00000453113781 bp173 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C6YB45
BRCA1-003OTTHUMT00000348800779 bp177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZW4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-017OTTHUMT00000348814769 bp222 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EQW4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-022OTTHUMT00000348819726 bp242 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y850 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
BRCA1-027OTTHUMT00000475526718 bp23 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G1UI37 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-025OTTHUMT00000453115563 bp96 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EJW3
BRCA1-016OTTHUMT00000348813455 bp98 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7ENB7 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
BRCA1-026OTTHUMT000004531161312 bp437 aa (view)
 
Non stop decay
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
BRCA1-010OTTHUMT000003488075693 bp63 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
BRCA1-002OTTHUMT000003487991584 bp59 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PC22
BRCA1-020OTTHUMT00000348817582 bp63 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
BRCA1-028OTTHUMT00000475525375 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
BRCA1-021OTTHUMT00000348818561 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays