Description
phospholipid scramblase 1
Synonyms
MMTRA1B
Location
Chromosome 3: 146,515,180-146,544,864 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 20 transcripts (splice variants), 5 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PLSCR1-001 | OTTHUMT00000355257.2 | 2233 | 318aa | OTTHUMP00000215253 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3135 | O15162 | |
| PLSCR1-002 | OTTHUMT00000355258.2 | 1443 | 311aa | OTTHUMP00000215254 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PLSCR1-007 | OTTHUMT00000355340.2 | 1198 | 249aa | OTTHUMP00000215311 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLSCR1-003 | OTTHUMT00000355259.1 | 996 | 237aa | OTTHUMP00000215255 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PLSCR1-014 | OTTHUMT00000355347.2 | 862 | 248aa | OTTHUMP00000215316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLSCR1-011 | OTTHUMT00000355344.2 | 701 | 171aa | OTTHUMP00000215314 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLSCR1-018 | OTTHUMT00000355351.2 | 514 | 171aa | OTTHUMP00000215319 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PLSCR1-017 | OTTHUMT00000355350.2 | 368 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PLSCR1-005 | OTTHUMT00000355261.1 | 1384 | 41aa | OTTHUMP00000215256 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-009 | OTTHUMT00000355342.1 | 984 | 41aa | OTTHUMP00000215313 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-008 | OTTHUMT00000355341.1 | 983 | 41aa | OTTHUMP00000215312 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-015 | OTTHUMT00000355348.1 | 870 | 41aa | OTTHUMP00000215317 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-012 | OTTHUMT00000355345.1 | 701 | 41aa | OTTHUMP00000215315 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-016 | OTTHUMT00000355349.1 | 581 | 41aa | OTTHUMP00000215318 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLSCR1-019 | OTTHUMT00000355352.1 | 629 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PLSCR1-006 | OTTHUMT00000355339.1 | 415 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PLSCR1-020 | OTTHUMT00000355353.1 | 340 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PLSCR1-004 | OTTHUMT00000355260.2 | 1257 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLSCR1-013 | OTTHUMT00000355346.1 | 817 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLSCR1-010 | OTTHUMT00000355343.1 | 480 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
