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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Gene: COLCA2 OTTHUMG00000166657

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Description

colorectal cancer associated 2

Synonyms

CASC13

Location

Chromosome 11: 111,298,555-111,308,735 forward strand.

VEGA68:CM000673.2

About this gene

This gene has 6 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COLCA2-001	OTTHUMT00000390991.1	1414	154aa	OTTHUMP00000233929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44728	A8K830
COLCA2-002	OTTHUMT00000390992.1	1332	154aa	OTTHUMP00000233930	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44728	A8K830
COLCA2-004	OTTHUMT00000492319.1	975	251aa	OTTHUMP00000283767	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73378	-
COLCA2-006	OTTHUMT00000492321.1	1080	286aa	OTTHUMP00000283769	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
COLCA2-003	OTTHUMT00000390990.3	823	106aa	OTTHUMP00000233928	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
COLCA2-005	OTTHUMT00000492320.1	1207	133aa	OTTHUMP00000283768	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-

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Summary

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Gene-based displays