Description
FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)
Synonyms
UTP24, Bka, CGI-35
Location
Chromosome 14: 74,713,144-74,738,620 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| FCF1-001 | OTTHUMT00000413622.2 | 4341 | 198aa | OTTHUMP00000246145 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9832 | Q4FZ45 | |
| FCF1-007 | OTTHUMT00000413625.1 | 794 | 186aa | OTTHUMP00000246148 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81827 | G3V1S4 | |
| FCF1-003 | OTTHUMT00000413626.1 | 954 | 183aa | OTTHUMP00000246149 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5S9 | |
| FCF1-002 | OTTHUMT00000413621.2 | 574 | 61aa | OTTHUMP00000246144 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V2M5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| FCF1-004 | OTTHUMT00000413629.1 | 1690 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| FCF1-005 | OTTHUMT00000413628.1 | 1466 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| FCF1-008 | OTTHUMT00000413624.1 | 605 | 52aa | OTTHUMP00000246147 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| FCF1-006 | OTTHUMT00000413623.1 | 571 | 65aa | OTTHUMP00000246146 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| FCF1-009 | OTTHUMT00000413627.1 | 547 | 40aa | OTTHUMP00000246150 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| FCF1-010 | OTTHUMT00000413630.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
