HumanVega Home
Description

regulatory factor X, 5 (influences HLA class II expression)

Location

Chromosome 1: 151,340,640-151,347,357 reverse strand.

VEGA65:CM000663.2

About this gene

This gene has 21 transcripts (splice variants).

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
RFX5-001OTTHUMT00000034892.63576616aaOTTHUMP00000082795
 
Protein coding
CCDS994P48382
RFX5-020OTTHUMT00000316353.12459616aaOTTHUMP00000196318
 
Protein coding
CCDS994P48382
RFX5-002OTTHUMT00000034893.42355616aaOTTHUMP00000014465
 
Protein coding
CCDS994P48382
RFX5-008OTTHUMT00000156127.62056596aaOTTHUMP00000082796
 
Protein coding
-F8W689 CDS 3' incomplete
RFX5-003OTTHUMT00000034894.3903184aaOTTHUMP00000196320
 
Protein coding
-F6UE82 CDS 3' incomplete
RFX5-004OTTHUMT00000034895.4902229aaOTTHUMP00000196321
 
Protein coding
-A0A0A0MSQ2 CDS 3' incomplete
RFX5-010OTTHUMT00000156129.7765235aaOTTHUMP00000081738
 
Protein coding
-H0Y4B4 CDS 5' incomplete
RFX5-011OTTHUMT00000316344.2597105aaOTTHUMP00000196315
 
Protein coding
--CDS 3' incomplete
RFX5-012OTTHUMT00000316345.2585123aaOTTHUMP00000196316
 
Protein coding
-F6X9D6 CDS 3' incomplete
RFX5-005OTTHUMT00000034896.18562117aaOTTHUMP00000196322
 
Protein coding
-A0A0A0MSM9 CDS 3' incomplete
RFX5-021OTTHUMT00000316354.254596aaOTTHUMP00000196319
 
Protein coding
--CDS 3' incomplete
RFX5-009OTTHUMT00000156128.6537165aaOTTHUMP00000081737
 
Protein coding
-F6R6G4 CDS 3' incomplete
RFX5-014OTTHUMT00000316347.359650aaOTTHUMP00000199557
 
Nonsense mediated decay
--
RFX5-018OTTHUMT00000316351.358342aaOTTHUMP00000199559
 
Nonsense mediated decay
--
RFX5-013OTTHUMT00000316346.456750aaOTTHUMP00000199556
 
Nonsense mediated decay
--
RFX5-017OTTHUMT00000316350.455844aaOTTHUMP00000199558
 
Nonsense mediated decay
--
RFX5-019OTTHUMT00000316352.2555No protein-
 
Processed transcript
--
RFX5-016OTTHUMT00000316349.1588No protein-
 
Retained intron
--
RFX5-015OTTHUMT00000316348.1583No protein-
 
Retained intron
--
RFX5-007OTTHUMT00000034898.2519No protein-
 
Retained intron
--
RFX5-006OTTHUMT00000034897.2396No protein-
 
Retained intron
--

Gene-based displays