Transcript: LRRTM1-003 OTTHUMT00000313615.4

Description

leucine rich repeat transmembrane neuronal 1

Location

Chromosome 2: 80,303,493-80,304,321 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130021 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRTM1-002	OTTHUMT00000313614.1	2599	522aa	OTTHUMP00000194829	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1966	Q86UE6
LRRTM1-007	OTTHUMT00000328763.1	2126	522aa	OTTHUMP00000202801	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1966	Q86UE6
LRRTM1-004	OTTHUMT00000313616.4	879	223aa	OTTHUMP00000203403	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRRTM1-005	OTTHUMT00000328751.4	765	183aa	OTTHUMP00000203404	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRRTM1-003	OTTHUMT00000313615.4	578	109aa	OTTHUMP00000203402	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRRTM1-006	OTTHUMT00000328752.1	4023	522aa	OTTHUMP00000202791	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS1966	Q86UE6
LRRTM1-001	OTTHUMT00000252294.5	3021	522aa	OTTHUMP00000202802	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS1966	Q86UE6

Summary

Statistics

Exons: 3 Transcript length: 578 bps Translation length: 109 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 18/08/2015 (Created on 06/11/2006)

Alternative symbols

AC011746.1-003

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 80,303,493-80,304,321 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000415098

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LRRTM1-003 OTTHUMT00000313615.4

Summary

Transcript-based displays