Transcript: SCNN1B-001 OTTHUMT00000254495.2

Description

sodium channel, nonvoltage-gated 1, beta

Location

Chromosome 16: 23,302,270-23,381,299 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000131608 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SCNN1B-001	OTTHUMT00000254495.2	2597	640aa	OTTHUMP00000162368	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10609	P51168
SCNN1B-002	OTTHUMT00000434810.3	2085	685aa	OTTHUMP00000255615	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SCNN1B-007	OTTHUMT00000434813.1	1852	613aa	OTTHUMP00000255618	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BRM4
SCNN1B-006	OTTHUMT00000434812.1	1825	604aa	OTTHUMP00000255617	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BQ95
SCNN1B-004	OTTHUMT00000434815.4	749	188aa	OTTHUMP00000274733	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WZI2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SCNN1B-005	OTTHUMT00000434811.1	1829	296aa	OTTHUMP00000255616	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BUQ8
SCNN1B-008	OTTHUMT00000434809.1	610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SCNN1B-003	OTTHUMT00000434816.1	519	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SCNN1B-009	OTTHUMT00000434814.1	560	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,597 bps Translation length: 640 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10609

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 14/12/2005)

Alternative symbols

AC008915.6-001

Other assemblies

This transcript maps to 23,302,270-23,381,299 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000343070

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SCNN1B-001 OTTHUMT00000254495.2

Summary

Transcript-based displays