Transcript: BLM-003 OTTHUMT00000417941.1

Description

Bloom syndrome, RecQ helicase-like

Location

Chromosome 15: 90,717,404-90,815,328 forward strand.

About this transcript

This transcript has 22 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000149834 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
BLM-001	OTTHUMT00000313495.2	5258	1417aa	OTTHUMP00000194750	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10363	P54132
BLM-002	OTTHUMT00000417940.1	3966	1286aa	OTTHUMP00000248161	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73782	H0YNU5
BLM-003	OTTHUMT00000417941.1	4510	413aa	OTTHUMP00000248162	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
BLM-004	OTTHUMT00000417946.1	2023	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BLM-010	OTTHUMT00000417949.1	1024	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BLM-006	OTTHUMT00000417942.1	866	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BLM-007	OTTHUMT00000417944.2	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BLM-009	OTTHUMT00000417945.1	533	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BLM-005	OTTHUMT00000417948.1	1683	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
BLM-011	OTTHUMT00000417947.1	747	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 22 Transcript length: 4,510 bps Translation length: 413 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/06/2011)

Alternative symbols

AC124248.3-003

Other assemblies

This transcript maps to 90,717,404-90,815,328 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000559724

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: BLM-003 OTTHUMT00000417941.1

Summary

Transcript-based displays