Transcript: TNFSF10-001 OTTHUMT00000346601.1

Description

tumor necrosis factor (ligand) superfamily, member 10

Location

About this transcript

This transcript has 5 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TNFSF10-001	OTTHUMT00000346601.1	1953	281aa	OTTHUMP00000211018	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3219	Q6IBA9
TNFSF10-002	OTTHUMT00000346602.1	1619	101aa	OTTHUMP00000211019	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54680	-
TNFSF10-007	OTTHUMT00000346607.1	467	74aa	OTTHUMP00000211021	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TNFSF10-004	OTTHUMT00000346604.2	1326	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TNFSF10-006	OTTHUMT00000346606.1	572	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TNFSF10-005	OTTHUMT00000346605.1	566	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,953 bps Translation length: 281 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3219

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 03/02/2009)

Alternative symbols

RP11-196F13.1-001

Other assemblies

This transcript maps to 172,505,508-172,523,507 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000241261

Curation Method

Manual annotation from Havana