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Updated annotation available

There is updated annotation for this transcript available here.

Description

ATPase type 13A2

Location
About this transcript

This transcript has 8 exons and is annotated with 3 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
ATP13A2-005OTTHUMT0000036816139811175aaOTTHUMP00000221711
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44073-
ATP13A2-001OTTHUMT0000000661738401180aaOTTHUMP00000002399
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS175Q9NQ11
ATP13A2-002OTTHUMT0000000661836811158aaOTTHUMP00000002400
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44072-
ATP13A2-007OTTHUMT000003681631201398aaOTTHUMP00000221712
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y953 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP13A2-009OTTHUMT00000368165962321aaOTTHUMP00000221714
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y9K0 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-014OTTHUMT00000368170774258aaOTTHUMP00000221718
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8I1 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-012OTTHUMT00000368168573191aaOTTHUMP00000221717
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y9K4 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-010OTTHUMT00000368166570191aaOTTHUMP00000221715
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y8Z6 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-011OTTHUMT00000368167569190aaOTTHUMP00000221716
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YAI7 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-008OTTHUMT00000368164562188aaOTTHUMP00000221713
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP13A2-004OTTHUMT000000066201851No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
ATP13A2-003OTTHUMT000000066191639No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
ATP13A2-006OTTHUMT00000368162687No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
ATP13A2-013OTTHUMT00000368169572No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 8 Transcript length: 562 bps Translation length: 188 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 26/10/2009)

Alternative symbols

RP1-37C10.4-008

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 17,000,283-17,005,395 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays