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Description

collagen, type XI, alpha 1

Gene

This transcript is a product of gene OTTHUMG00000010872

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
COL11A1-001OTTHUMT0000002999772861806 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS778P12107
COL11A1-008OTTHUMT0000036066654421690 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS780-
COL11A1-002OTTHUMT000000299981709570 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
COL11A1-003OTTHUMT00000029999776200 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL11A1-004OTTHUMT00000030000678No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
COL11A1-005OTTHUMT00000030001377No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
COL11A1-007OTTHUMT00000030087785No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
COL11A1-006OTTHUMT00000030086297No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 11 Transcript length: 678 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 29/01/2004)

Alternative symbols

RP5-936J12.3-004

Other assemblies

This transcript maps to 103,001,014-103,008,493 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays