Description

synaptic Ras GTPase activating protein 1 homolog (rat)

Location
About this transcript

This transcript has 20 exons and is annotated with 24 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SYNGAP1-001OTTHUMT0000007615198621343aaOTTHUMP00000029119
 
Protein coding
CCDS34434Q96PV0
SYNGAP1-010OTTHUMT0000034267858281285aaOTTHUMP00000278516
 
Protein coding
--
SYNGAP1-003OTTHUMT0000025890143391284aaOTTHUMP00000165802
 
Protein coding
--
SYNGAP1-007OTTHUMT0000025890542641299aaOTTHUMP00000275564
 
Protein coding
--
SYNGAP1-009OTTHUMT0000034267739301306aaOTTHUMP00000209046
 
Protein coding
-B7ZCA0 CDS 3' incomplete
SYNGAP1-025OTTHUMT0000049035212325aaOTTHUMP00000282657
 
Protein coding
--CDS 3' incomplete
SYNGAP1-006OTTHUMT000003426761912No protein-
 
Artifact
--
SYNGAP1-005OTTHUMT000002589038162592aaOTTHUMP00000282656
 
Nonsense mediated decay
--
SYNGAP1-004OTTHUMT0000025890245561284aaOTTHUMP00000275563
 
Nonsense mediated decay
-A0A0A0MQZ2 CDS 5' incomplete
SYNGAP1-019OTTHUMT00000490347191No protein-
 
Processed transcript
--
SYNGAP1-024OTTHUMT00000490351190No protein-
 
Processed transcript
--
SYNGAP1-014OTTHUMT00000490339161No protein-
 
Processed transcript
--
SYNGAP1-030OTTHUMT00000490357161No protein-
 
Processed transcript
--
SYNGAP1-012OTTHUMT00000490341157No protein-
 
Processed transcript
--
SYNGAP1-016OTTHUMT00000490340148No protein-
 
Processed transcript
--
SYNGAP1-021OTTHUMT00000490344148No protein-
 
Processed transcript
--
SYNGAP1-013OTTHUMT00000490342132No protein-
 
Processed transcript
--
SYNGAP1-027OTTHUMT00000490354118No protein-
 
Processed transcript
--
SYNGAP1-011OTTHUMT00000490338100No protein-
 
Processed transcript
--
SYNGAP1-017OTTHUMT00000490345100No protein-
 
Processed transcript
--
SYNGAP1-018OTTHUMT00000490346100No protein-
 
Processed transcript
--
SYNGAP1-022OTTHUMT00000490349100No protein-
 
Processed transcript
--
SYNGAP1-023OTTHUMT00000490350100No protein-
 
Processed transcript
--
SYNGAP1-026OTTHUMT00000490353100No protein-
 
Processed transcript
--
SYNGAP1-028OTTHUMT00000490355100No protein-
 
Processed transcript
--
SYNGAP1-029OTTHUMT00000490356100No protein-
 
Processed transcript
--
SYNGAP1-020OTTHUMT0000049034879No protein-
 
Processed transcript
--
SYNGAP1-002OTTHUMT000002589002073No protein-
 
Retained intron
--
SYNGAP1-008OTTHUMT00000258906394No protein-
 
Retained intron
--
Statistics

Exons: 20 Transcript length: 4,556 bps Translation length: 1,284 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 15/02/2016 (Created on 07/04/2006)

Alternative symbols

XXbac-BPG294E21.1-004

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 33,420,310-33,452,395 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays