Updated annotation

The annotation for this transcript is newer than that present in Ensembl.

Description

paired box 6

Location
About this transcript

This transcript has 13 exons and is annotated with 22 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
PAX6-003OTTHUMT00000099288.37300422aaOTTHUMP00000038835
 
Protein coding
CCDS31451P26367
PAX6-013OTTHUMT00000099340.46975436aaOTTHUMP00000038849
 
Protein coding
CCDS31452B1B1I8
PAX6-038OTTHUMT00000492097.16901436aaOTTHUMP00000283671
 
Protein coding
CCDS31452-
PAX6-001OTTHUMT00000099286.46888436aaOTTHUMP00000038833
 
Protein coding
CCDS31452F1T0F8
PAX6-004OTTHUMT00000099289.63182422aaOTTHUMP00000038836
 
Protein coding
CCDS31451P26367
PAX6-002OTTHUMT00000099287.42730422aaOTTHUMP00000038834
 
Protein coding
CCDS31451P26367
PAX6-005OTTHUMT00000099290.42622422aaOTTHUMP00000038837
 
Protein coding
CCDS31451P26367
PAX6-012OTTHUMT00000099297.62620436aaOTTHUMP00000038841
 
Protein coding
CCDS31452B1B1I9
PAX6-009OTTHUMT00000099294.32614436aaOTTHUMP00000038839
 
Protein coding
CCDS31452F1T0F8
PAX6-011OTTHUMT00000099296.42579436aaOTTHUMP00000038840
 
Protein coding
CCDS31452F1T0F8
PAX6-008OTTHUMT00000099293.42576422aaOTTHUMP00000038838
 
Protein coding
CCDS31451P26367
PAX6-035OTTHUMT00000492080.12553436aaOTTHUMP00000283665
 
Protein coding
CCDS31452-
PAX6-036OTTHUMT00000492079.12450436aaOTTHUMP00000283664
 
Protein coding
CCDS31452-
PAX6-018OTTHUMT00000492071.21736422aaOTTHUMP00000283656
 
Protein coding
CCDS31451-
PAX6-006OTTHUMT00000099291.42844286aaOTTHUMP00000283666
 
Protein coding
--
PAX6-057OTTHUMT00000492130.12734277aaOTTHUMP00000283687
 
Protein coding
--CDS 3' incomplete
PAX6-076OTTHUMT00000492156.12608263aaOTTHUMP00000283706
 
Protein coding
--CDS 3' incomplete
PAX6-073OTTHUMT00000492148.12584314aaOTTHUMP00000283699
 
Protein coding
--CDS 3' incomplete
PAX6-055OTTHUMT00000492133.12580238aaOTTHUMP00000283690
 
Protein coding
--CDS 3' incomplete
PAX6-034OTTHUMT00000492078.12372302aaOTTHUMP00000283663
 
Protein coding
--
PAX6-026OTTHUMT00000389009.32367281aaOTTHUMP00000283660
 
Protein coding
--CDS 3' incomplete
PAX6-021OTTHUMT00000389013.42221417aaOTTHUMP00000232535
 
Protein coding
-E9PKM0 CDS 3' incomplete
PAX6-020OTTHUMT00000389016.42133419aaOTTHUMP00000232536
 
Protein coding
--CDS 3' incomplete
PAX6-068OTTHUMT00000492134.12037370aaOTTHUMP00000283691
 
Protein coding
--CDS 3' incomplete
PAX6-054OTTHUMT00000492126.11923282aaOTTHUMP00000283685
 
Protein coding
--CDS 3' incomplete
PAX6-075OTTHUMT00000492153.11863260aaOTTHUMP00000283704
 
Protein coding
--CDS 3' incomplete
PAX6-031OTTHUMT00000492081.11797283aaOTTHUMP00000283667
 
Protein coding
--CDS 3' incomplete
PAX6-061OTTHUMT00000492131.11736413aaOTTHUMP00000283688
 
Protein coding
--CDS 3' incomplete
PAX6-014OTTHUMT00000099341.41723286aaOTTHUMP00000283649
 
Protein coding
--
PAX6-072OTTHUMT00000492147.21718419aaOTTHUMP00000283698
 
Protein coding
--CDS 3' incomplete
PAX6-039OTTHUMT00000492104.31597401aaOTTHUMP00000283678
 
Protein coding
--
PAX6-015OTTHUMT00000099342.41587286aaOTTHUMP00000283657
 
Protein coding
--
PAX6-044OTTHUMT00000492098.11580473aaOTTHUMP00000283672
 
Protein coding
--
PAX6-059OTTHUMT00000492137.11557415aaOTTHUMP00000283692
 
Protein coding
--
PAX6-063OTTHUMT00000492132.11531335aaOTTHUMP00000283689
 
Protein coding
--CDS 3' incomplete
PAX6-016OTTHUMT00000099343.71525368aaOTTHUMP00000038850
 
Protein coding
-B1B1J0 CDS 3' incomplete
PAX6-062OTTHUMT00000492123.11521367aaOTTHUMP00000283682
 
Protein coding
--CDS 3' incomplete
PAX6-027OTTHUMT00000389008.41507249aaOTTHUMP00000283661
 
Protein coding
--CDS 3' incomplete
PAX6-082OTTHUMT00000492152.11505263aaOTTHUMP00000283703
 
Protein coding
--CDS 3' incomplete
PAX6-081OTTHUMT00000492150.11485422aaOTTHUMP00000283701
 
Protein coding
--CDS 3' incomplete
PAX6-056OTTHUMT00000492125.11483282aaOTTHUMP00000283684
 
Protein coding
--CDS 3' incomplete
PAX6-077OTTHUMT00000492151.11473283aaOTTHUMP00000283702
 
Protein coding
--CDS 3' incomplete
PAX6-040OTTHUMT00000492099.11417286aaOTTHUMP00000283673
 
Protein coding
--
PAX6-079OTTHUMT00000492155.11395320aaOTTHUMP00000283705
 
Protein coding
--CDS 3' incomplete
PAX6-041OTTHUMT00000492100.11375286aaOTTHUMP00000283674
 
Protein coding
--
PAX6-025OTTHUMT00000389011.21369231aaOTTHUMP00000283662
 
Protein coding
--CDS 3' incomplete
PAX6-071OTTHUMT00000492149.11298341aaOTTHUMP00000283700
 
Protein coding
--CDS 3' incomplete
PAX6-052OTTHUMT00000492124.11267382aaOTTHUMP00000283683
 
Protein coding
--CDS 3' incomplete
PAX6-032OTTHUMT00000492082.11248277aaOTTHUMP00000283668
 
Protein coding
--CDS 3' incomplete
PAX6-042OTTHUMT00000492101.11203400aaOTTHUMP00000283675
 
Protein coding
--
PAX6-053OTTHUMT00000492138.11202241aaOTTHUMP00000283693
 
Protein coding
--CDS 3' incomplete
PAX6-043OTTHUMT00000492102.11161386aaOTTHUMP00000283676
 
Protein coding
--
PAX6-010OTTHUMT00000099295.4979221aaOTTHUMP00000283650
 
Protein coding
--
PAX6-050OTTHUMT00000492103.1964205aaOTTHUMP00000283677
 
Protein coding
--CDS 3' incomplete
PAX6-046OTTHUMT00000492105.18753aaOTTHUMP00000283679
 
Protein coding
--CDS 3' incomplete
PAX6-067OTTHUMT00000492140.167672aaOTTHUMP00000283694
 
Protein coding
--CDS 3' incomplete
PAX6-066OTTHUMT00000492128.11988163aaOTTHUMP00000283686
 
Nonsense mediated decay
--
PAX6-029OTTHUMT00000389012.2848No protein-
 
Processed transcript
--
PAX6-028OTTHUMT00000389007.3846No protein-
 
Processed transcript
--
PAX6-033OTTHUMT00000492083.1785No protein-
 
Processed transcript
--
PAX6-064OTTHUMT00000492139.1650No protein-
 
Processed transcript
--
PAX6-047OTTHUMT00000492106.1649No protein-
 
Processed transcript
--
PAX6-024OTTHUMT00000389010.2540No protein-
 
Processed transcript
--
PAX6-037OTTHUMT00000492109.1532No protein-
 
Processed transcript
--
PAX6-049OTTHUMT00000492107.1417No protein-
 
Processed transcript
--
PAX6-048OTTHUMT00000492108.1412No protein-
 
Processed transcript
--
PAX6-045OTTHUMT00000492110.1368No protein-
 
Processed transcript
--
PAX6-019OTTHUMT00000388970.36173No protein-
 
Retained intron
--
PAX6-017OTTHUMT00000099344.34392No protein-
 
Retained intron
--
PAX6-007OTTHUMT00000099292.63587No protein-
 
Retained intron
--
PAX6-051OTTHUMT00000492136.12525No protein-
 
Retained intron
--
PAX6-070OTTHUMT00000492144.12423No protein-
 
Retained intron
--
PAX6-069OTTHUMT00000492146.12390No protein-
 
Retained intron
--
PAX6-078OTTHUMT00000492154.12254No protein-
 
Retained intron
--
PAX6-058OTTHUMT00000492129.12060No protein-
 
Retained intron
--
PAX6-065OTTHUMT00000492135.11958No protein-
 
Retained intron
--
PAX6-074OTTHUMT00000492145.11911No protein-
 
Retained intron
--
PAX6-080OTTHUMT00000492157.11084No protein-
 
Retained intron
--
PAX6-060OTTHUMT00000492127.1781No protein-
 
Retained intron
--
PAX6-030OTTHUMT00000389006.2627No protein-
 
Retained intron
--
PAX6-023OTTHUMT00000389015.1524No protein-
 
Retained intron
--
PAX6-022OTTHUMT00000389014.1487No protein-
 
Retained intron
--
Statistics

Exons: 13 Transcript length: 1,525 bps Translation length: 368 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 7, last modified on 28/07/2016 (Created on 15/06/2004)

Alternative symbols

Z83307.1-016

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 31,789,938-31,811,118 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays