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Description

solute carrier family 22 (organic cation/carnitine transporter), member 5

Synonyms

Gene

This transcript is a product of gene OTTHUMG00000059634

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
SLC22A5-001OTTHUMT000001326313237 bp557 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4154O76082
SLC22A5-004OTTHUMT00000148100720 bp240 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7BZC0 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
SLC22A5-005OTTHUMT00000148101998 bp37 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SLC22A5-002OTTHUMT00000132632852 bp136 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H7C1R8 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SLC22A5-008OTTHUMT00000339918850 bp141 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
SLC22A5-007OTTHUMT00000315757561 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
SLC22A5-006OTTHUMT0000014810210435 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
SLC22A5-003OTTHUMT000001326333693 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 9 Transcript length: 10,435 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 26/04/2005)

Alternative symbols

AC118464.1-006

Other assemblies

This transcript maps to 132,376,086-132,395,611 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays