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Description

vacuolar protein sorting 35 homolog (S. cerevisiae)

Location
Gene

This transcript is a product of gene OTTHUMG00000132542

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDS
VPS35-001OTTHUMT000002557426790OTTHUMP00000163364796Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS10721
VPS35-002OTTHUMT000004305914017OTTHUMP0000025394148Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
VPS35-008OTTHUMT00000430597697OTTHUMP0000025886841Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
VPS35-005OTTHUMT00000430598589OTTHUMP0000025886947Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
VPS35-012OTTHUMT00000430593447No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-
VPS35-003OTTHUMT000004305941096No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
VPS35-004OTTHUMT00000430600775No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
VPS35-006OTTHUMT00000430596759No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
VPS35-011OTTHUMT00000430592740No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
VPS35-007OTTHUMT00000430599520No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
VPS35-010OTTHUMT00000430595487No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.-
Statistics

Exons: 2 Transcript length: 520 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/08/2011)

Alternative symbols

AC106819.3-007

Other assemblies

This transcript maps to 46,715,668-46,717,519 in GRCh37 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays