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Description

brain-derived neurotrophic factor

Location
Gene

This transcript is a product of gene OTTHUMG00000178797

This gene has 18 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDS
BDNF-016OTTHUMT000003881354766OTTHUMP00000232040247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-015OTTHUMT000003881344532OTTHUMP00000232039247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-018OTTHUMT000003881384340OTTHUMP00000232043255Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7865
BDNF-011OTTHUMT000003880974125OTTHUMP00000232014247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-002OTTHUMT000003880854071OTTHUMP00000232005247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-008OTTHUMT000003881024059OTTHUMP00000232019329Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS44558
BDNF-010OTTHUMT000003880964018OTTHUMP00000232013247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-012OTTHUMT000003880984000OTTHUMP00000232015247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-003OTTHUMT000003881053988OTTHUMP00000232022247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-013OTTHUMT000003881363979OTTHUMP00000232041262Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS41628
BDNF-004OTTHUMT000003881043930OTTHUMP00000232021247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-009OTTHUMT000003880993918OTTHUMP00000232016247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-014OTTHUMT000003881373878OTTHUMP00000232042247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-001OTTHUMT000003880863829OTTHUMP00000232006247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-007OTTHUMT000003881013776OTTHUMP00000232018247Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS7866
BDNF-017OTTHUMT000003881391035No protein product-ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.-
BDNF-006OTTHUMT000003881004176OTTHUMP0000023201777Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
BDNF-005OTTHUMT000003881034030No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-
Statistics

Exons: 2 Transcript length: 3,878 bps Translation length: 247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7866

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 18/06/2010)

Alternative symbols

RP11-587D21.3-014

Remarks

alternative 5' UTR

non canonical conserved

Other assemblies

This transcript maps to 27,676,440-27,721,214 in GRCh37 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Ensembl transcript sharing CDS with Havana:
Curation Method

Transcript-based displays