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Description

brain-derived neurotrophic factor

Location
About this transcript

This transcript has 2 exons and is annotated with 16 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
BDNF-016OTTHUMT000003881354766247aaOTTHUMP00000232040
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-015OTTHUMT000003881344532247aaOTTHUMP00000232039
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-018OTTHUMT000003881384340255aaOTTHUMP00000232043
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7865-
BDNF-011OTTHUMT000003880974125247aaOTTHUMP00000232014
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-002OTTHUMT000003880854071247aaOTTHUMP00000232005
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-008OTTHUMT000003881024059329aaOTTHUMP00000232019
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44558-
BDNF-010OTTHUMT000003880964018247aaOTTHUMP00000232013
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-012OTTHUMT000003880984000247aaOTTHUMP00000232015
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-003OTTHUMT000003881053988247aaOTTHUMP00000232022
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-013OTTHUMT000003881363979262aaOTTHUMP00000232041
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41628-
BDNF-004OTTHUMT000003881043930247aaOTTHUMP00000232021
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-009OTTHUMT000003880993918247aaOTTHUMP00000232016
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-014OTTHUMT000003881373878247aaOTTHUMP00000232042
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-001OTTHUMT000003880863829247aaOTTHUMP00000232006
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-007OTTHUMT000003881013776247aaOTTHUMP00000232018
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560
BDNF-017OTTHUMT000003881391035No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
BDNF-006OTTHUMT00000388100417677aaOTTHUMP00000232017
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PMP3
BDNF-005OTTHUMT000003881034030No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Statistics

Exons: 2 Transcript length: 3,878 bps Translation length: 247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7866

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 18/06/2010)

Alternative symbols

RP11-587D21.3-014

Remarks

alternative 5' UTR

non canonical conserved

Other assemblies

This transcript maps to 27,654,893-27,699,667 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays