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Description

aprataxin

Location
About this transcript

This transcript has 8 exons and is annotated with 13 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
APTX-002OTTHUMT00000052027.32023306aaOTTHUMP00000021189
 
Protein coding
CCDS6532-
APTX-006OTTHUMT00000355312.11068302aaOTTHUMP00000215291
 
Protein coding
CCDS56568-
APTX-011OTTHUMT00000355317.22106342aaOTTHUMP00000215296
 
Protein coding
--
APTX-003OTTHUMT00000052028.21820356aaOTTHUMP00000021190
 
Protein coding
-Q7Z2E3
APTX-021OTTHUMT00000355327.21740284aaOTTHUMP00000215305
 
Protein coding
--
APTX-017OTTHUMT00000355323.11455342aaOTTHUMP00000215302
 
Protein coding
--
APTX-007OTTHUMT00000355313.11345342aaOTTHUMP00000215292
 
Protein coding
--
APTX-025OTTHUMT00000355331.2687216aaOTTHUMP00000215306
 
Protein coding
-C9JZ40 CDS 3' incomplete
APTX-030OTTHUMT00000355336.1599198aaOTTHUMP00000215310
 
Protein coding
-F8W6G5 CDS 3' incomplete
APTX-026OTTHUMT00000355332.2568155aaOTTHUMP00000215307
 
Protein coding
-C9J8U3 CDS 3' incomplete
APTX-020OTTHUMT00000355326.11629No protein-
 
Artifact
--
APTX-012OTTHUMT00000355318.1210149aaOTTHUMP00000215297
 
Nonsense mediated decay
--
APTX-009OTTHUMT00000355315.1209949aaOTTHUMP00000215294
 
Nonsense mediated decay
--
APTX-001OTTHUMT00000052026.2199185aaOTTHUMP00000021188
 
Nonsense mediated decay
-Q6JV79
APTX-010OTTHUMT00000355316.1198649aaOTTHUMP00000215295
 
Nonsense mediated decay
--
APTX-004OTTHUMT00000052029.2188149aaOTTHUMP00000021191
 
Nonsense mediated decay
--
APTX-015OTTHUMT00000355321.11879192aaOTTHUMP00000215300
 
Nonsense mediated decay
--
APTX-016OTTHUMT00000355322.1187449aaOTTHUMP00000215301
 
Nonsense mediated decay
--
APTX-014OTTHUMT00000355320.1176485aaOTTHUMP00000215299
 
Nonsense mediated decay
-Q6JV79
APTX-013OTTHUMT00000355319.1175949aaOTTHUMP00000215298
 
Nonsense mediated decay
--
APTX-008OTTHUMT00000355314.1131349aaOTTHUMP00000215293
 
Nonsense mediated decay
--
APTX-028OTTHUMT00000355334.295274aaOTTHUMP00000215309
 
Nonsense mediated decay
-F8WBM3 CDS 5' incomplete
APTX-019OTTHUMT00000355325.168499aaOTTHUMP00000215304
 
Nonsense mediated decay
-E7EVB7
APTX-018OTTHUMT00000355324.167963aaOTTHUMP00000215303
 
Nonsense mediated decay
-E7EUY4
APTX-027OTTHUMT00000355333.167452aaOTTHUMP00000215308
 
Nonsense mediated decay
-F8WBD6
APTX-023OTTHUMT00000355329.1645No protein-
 
Processed transcript
--
APTX-032OTTHUMT00000355338.1556No protein-
 
Processed transcript
--
APTX-022OTTHUMT00000355328.1542No protein-
 
Processed transcript
--
APTX-024OTTHUMT00000355330.1397No protein-
 
Processed transcript
--
APTX-031OTTHUMT00000355337.1633No protein-
 
Retained intron
--
APTX-029OTTHUMT00000355335.1547No protein-
 
Retained intron
--
Statistics

Exons: 8 Transcript length: 1,820 bps Translation length: 356 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 08/10/2014 (Created on 11/12/2003)

Alternative symbols

RP11-562M8.1-003

Other assemblies

This transcript maps to 32,972,749-33,001,604 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays