Transcript: PREX1-002 OTTHUMT00000079624.3

Description

phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1

Location

About this transcript

This transcript has 22 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PREX1-001	OTTHUMT00000079623.1	6636	1659aa	OTTHUMP00000031228	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13410	Q8TCU6
PREX1-004	OTTHUMT00000474059.1	362	12aa	OTTHUMP00000274824	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PREX1-002	OTTHUMT00000079624.3	4682	883aa	OTTHUMP00000031229	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PREX1-003	OTTHUMT00000079625.1	478	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 22 Transcript length: 4,682 bps Translation length: 883 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 17/03/2003)

Alternative symbols

RP11-269H4.1-002

Remarks

P-Rex1 (PREX1)

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 48,624,252-48,657,127 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000482556

Curation Method

Manual annotation from Havana