Transcript: GORAB-001 OTTHUMT00000085226.1

Description

golgin, RAB6-interacting

Location

Chromosome 1: 170,532,129-170,553,446 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000035228 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GORAB-001	OTTHUMT00000085226.1	2189	394aa	OTTHUMP00000033164	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1289	Q5T7V8
GORAB-002	OTTHUMT00000085227.1	1699	246aa	OTTHUMP00000033165	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53428	-
GORAB-003	OTTHUMT00000085228.2	2393	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GORAB-004	OTTHUMT00000085229.2	2467	126aa	OTTHUMP00000272041	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GORAB-006	OTTHUMT00000085231.1	597	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GORAB-005	OTTHUMT00000085230.1	2185	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GORAB-007	OTTHUMT00000085232.1	468	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,189 bps Translation length: 394 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1289

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 26/03/2004)

Alternative symbols

RP11-545I10.1-001

Other assemblies

This transcript maps to 170,532,129-170,553,446 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000367763

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GORAB-001 OTTHUMT00000085226.1

Summary

Transcript-based displays