Transcript: LPL-001 OTTHUMT00000089113.3

Description

lipoprotein lipase

Location

Chromosome 8: 19,938,971-19,967,258 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000036645 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LPL-001	OTTHUMT00000089113.3	3846	475aa	OTTHUMP00000034806	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6012	A0A1B1RVA9
LPL-003	OTTHUMT00000374963.2	629	129aa	OTTHUMP00000224635	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RJI0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LPL-006	OTTHUMT00000374962.2	560	115aa	OTTHUMP00000224634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7EW14	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LPL-004	OTTHUMT00000374964.2	559	105aa	OTTHUMP00000224636	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RHN7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LPL-002	OTTHUMT00000374965.1	2385	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LPL-007	OTTHUMT00000375114.1	554	39aa	OTTHUMP00000224711	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LPL-005	OTTHUMT00000374966.1	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LPL-008	OTTHUMT00000375115.1	463	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 3,846 bps Translation length: 475 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6012

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 27/04/2004)

Alternative symbols

AC100802.1-001

Other assemblies

This transcript maps to 19,938,971-19,967,258 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000311322

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LPL-001 OTTHUMT00000089113.3

Summary

Transcript-based displays