Transcript: ERCC4-002 OTTHUMT00000109635.2

Description

excision repair cross-complementing rodent repair deficiency, complementation group 4

Location

Chromosome 16: 13,937,764-13,948,004 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTHUMG00000048194 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ERCC4-001	OTTHUMT00000109634.2	6758	916aa	OTTHUMP00000045868	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32390	Q92889
ERCC4-003	OTTHUMT00000436400.2	2073	372aa	OTTHUMP00000256508	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ERCC4-002	OTTHUMT00000109635.2	721	35aa	OTTHUMP00000256510	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERCC4-007	OTTHUMT00000436609.1	583	75aa	OTTHUMP00000256509	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERCC4-006	OTTHUMT00000436610.1	638	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ERCC4-004	OTTHUMT00000436611.1	2106	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ERCC4-005	OTTHUMT00000436608.1	604	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ERCC4-008	OTTHUMT00000436612.1	523	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 721 bps Translation length: 35 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 27/11/2002)

Alternative symbols

AC009173.1-002

Remarks

DNA-repair protein complementing XP-F cell (Xeroderma pigmentosum group F complementing protein) (DNA excision repair protein ERCC-4)

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 13,937,764-13,948,004 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000462862

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ERCC4-002 OTTHUMT00000109635.2

Summary

Transcript-based displays