Transcript: HLA-DQB1-009 OTTHUMT00000310431.1

Description

major histocompatibility complex, class II, DQ beta 1

Location

Chromosome 6-DBB: 3,893,012-3,893,566 reverse strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene OTTHUMG00000149067 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-DQB1-002	OTTHUMT00000310423.2	1789	269aa	OTTHUMP00000193467	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	U3PYL3
HLA-DQB1-003	OTTHUMT00000310425.2	1734	261aa	OTTHUMP00000193469	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	U3PYL3
HLA-DQB1-001	OTTHUMT00000310424.2	1642	261aa	OTTHUMP00000193468	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	U3PYL3
HLA-DQB1-004	OTTHUMT00000310426.2	1484	224aa	OTTHUMP00000193470	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q29967
HLA-DQB1-007	OTTHUMT00000310429.2	1219	134aa	OTTHUMP00000193472	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
HLA-DQB1-006	OTTHUMT00000310428.2	484	144aa	OTTHUMP00000193471	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140T981	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HLA-DQB1-008	OTTHUMT00000310430.2	1423	136aa	OTTHUMP00000233388	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A140T9Z9
HLA-DQB1-009	OTTHUMT00000310431.1	428	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DQB1-005	OTTHUMT00000310427.1	4631	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 428 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 14/07/2010 (Created on 31/10/2006)

Alternative symbols

DADB-249P12.2-009

Other assemblies

This transcript maps to 32,635,122-32,635,676 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000486521

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HLA-DQB1-009 OTTHUMT00000310431.1

Summary

Transcript-based displays