Transcript: LYSMD4-001 OTTHUMT00000313544.1

Description

LysM, putative peptidoglycan-binding, domain containing 4

Location

Chromosome 15: 99,727,405-99,733,421 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000149853 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LYSMD4-001	OTTHUMT00000313544.1	2885	297aa	OTTHUMP00000194788	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10381	-
LYSMD4-005	OTTHUMT00000335634.2	2672	296aa	OTTHUMP00000205869	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS66877	Q5XG99
LYSMD4-002	OTTHUMT00000313545.2	559	123aa	OTTHUMP00000194789	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LYSMD4-008	OTTHUMT00000468177.1	2356	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LYSMD4-003	OTTHUMT00000335632.1	2222	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LYSMD4-006	OTTHUMT00000335635.2	551	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LYSMD4-004	OTTHUMT00000335633.2	3001	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LYSMD4-007	OTTHUMT00000335636.2	880	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,885 bps Translation length: 297 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10381

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 03/11/2006)

Alternative symbols

AC022692.2-001

Remarks

protein_id: AAH41097.2

Other assemblies

This transcript maps to 99,727,405-99,733,421 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000344791

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LYSMD4-001 OTTHUMT00000313544.1

Summary

Transcript-based displays