Transcript: ARSA-004 OTTHUMT00000316728.2

Description

arylsulfatase A

Location

Chromosome 22: 50,625,018-50,628,170 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150180 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARSA-001	OTTHUMT00000316725.2	2050	509aa	OTTHUMP00000196544	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-005	OTTHUMT00000316729.2	1918	509aa	OTTHUMP00000196548	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-004	OTTHUMT00000316728.2	1895	509aa	OTTHUMP00000196547	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-003	OTTHUMT00000316727.2	1824	509aa	OTTHUMP00000196546	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-002	OTTHUMT00000316726.1	1650	423aa	OTTHUMP00000196545	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46736	-
ARSA-007	OTTHUMT00000472283.1	576	69aa	OTTHUMP00000274246	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GYR0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARSA-008	OTTHUMT00000472282.1	573	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARSA-006	OTTHUMT00000407082.1	1431	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,895 bps Translation length: 509 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS14100

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 23/03/2007)

Alternative symbols

CTA-384D8.17-004

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 50,625,018-50,628,170 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000356098

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARSA-004 OTTHUMT00000316728.2

Summary

Transcript-based displays