Description
EGF-containing fibulin-like extracellular matrix protein 1
Location
Chromosome 2: 55,917,665-55,923,781 reverse strand.
About this transcript
This transcript has 5 exons and is annotated with 11 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000129343 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| EFEMP1-001 | OTTHUMT00000251491.2 | 3024 | 493aa | OTTHUMP00000159697 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1857 | A0A0S2Z4F1 | |
| EFEMP1-003 | OTTHUMT00000324899.1 | 1820 | 493aa | OTTHUMP00000201001 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1857 | A0A0S2Z4F1 | |
| EFEMP1-016 | OTTHUMT00000488047.1 | 1007 | 280aa | OTTHUMP00000281201 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQV3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EFEMP1-008 | OTTHUMT00000324904.2 | 733 | 172aa | OTTHUMP00000201006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q580Q6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-004 | OTTHUMT00000324900.2 | 572 | 119aa | OTTHUMP00000201002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JPZ9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-006 | OTTHUMT00000324902.2 | 559 | 106aa | OTTHUMP00000201004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J4J8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-005 | OTTHUMT00000324901.2 | 558 | 87aa | OTTHUMP00000201003 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JQX7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-011 | OTTHUMT00000324907.2 | 552 | 61aa | OTTHUMP00000201008 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JUM4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-009 | OTTHUMT00000324905.2 | 547 | 51aa | OTTHUMP00000201007 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-007 | OTTHUMT00000324903.2 | 339 | 27aa | OTTHUMP00000201005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| EFEMP1-002 | OTTHUMT00000324898.2 | 1837 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| EFEMP1-015 | OTTHUMT00000488048.1 | 1276 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| EFEMP1-014 | OTTHUMT00000488046.1 | 1809 | 46aa | OTTHUMP00000281200 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| EFEMP1-010 | OTTHUMT00000324906.1 | 604 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EFEMP1-013 | OTTHUMT00000324909.1 | 563 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EFEMP1-012 | OTTHUMT00000324908.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
