Transcript: LANCL1-010 OTTHUMT00000336822.3

Description

LanC lantibiotic synthetase component C-like 1 (bacterial)

Location

Chromosome 2: 210,434,521-210,440,745 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000132991 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LANCL1-005	OTTHUMT00000336817.1	4781	399aa	OTTHUMP00000206537	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2392	O43813
LANCL1-001	OTTHUMT00000256565.4	4602	399aa	OTTHUMP00000163940	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2392	O43813
LANCL1-007	OTTHUMT00000336819.2	4503	399aa	OTTHUMP00000206538	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2392	O43813
LANCL1-004	OTTHUMT00000336816.1	1647	399aa	OTTHUMP00000206536	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2392	O43813
LANCL1-003	OTTHUMT00000336815.2	1270	399aa	OTTHUMP00000206535	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2392	O43813
LANCL1-008	OTTHUMT00000336820.2	808	196aa	OTTHUMP00000206539	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LANCL1-010	OTTHUMT00000336822.3	441	147aa	OTTHUMP00000209437	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C2E3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
LANCL1-009	OTTHUMT00000336821.1	590	82aa	OTTHUMP00000206540	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4 Transcript length: 441 bps Translation length: 147 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 25/09/2008)

Alternative symbols

AC007038.4-010

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 210,434,521-210,440,745 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000412863

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LANCL1-010 OTTHUMT00000336822.3

Summary

Transcript-based displays