Transcript: ARL5A-004 OTTHUMT00000338351.3

Description

ADP-ribosylation factor-like 5A

Location

About this transcript

This transcript has 9 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
ARL5A-001	OTTHUMT00000254837.1	5326	179aa	OTTHUMP00000162713	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2195	Q9Y689
ARL5A-002	OTTHUMT00000338349.3	747	142aa	OTTHUMP00000207220	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46425	-
ARL5A-004	OTTHUMT00000338351.3	1268	142aa	OTTHUMP00000207221	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS46425	-
ARL5A-003	OTTHUMT00000338350.4	1076	77aa	OTTHUMP00000209450	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WER2
ARL5A-007	OTTHUMT00000338354.1	696	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARL5A-006	OTTHUMT00000338353.1	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARL5A-005	OTTHUMT00000338352.1	428	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,268 bps Translation length: 142 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46425

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 16/10/2008)

Alternative symbols

AC097448.1-004

Remarks

NAGNAG splice site

Other assemblies

This transcript maps to 151,789,078-151,828,441 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000446896

Curation Method

Manual annotation from Havana