Transcript: ABCA13-005 OTTHUMT00000341968.2

Description

ATP-binding cassette, sub-family A (ABC1), member 13

Location

Chromosome 7: 48,507,872-48,520,145 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000155840 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ABCA13-001	OTTHUMT00000341964.3	17184	5058aa	OTTHUMP00000208774	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47584	Q86UQ4
ABCA13-008	OTTHUMT00000476350.3	7870	2366aa	OTTHUMP00000275589	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5H7B7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ABCA13-003	OTTHUMT00000341966.2	4480	831aa	OTTHUMP00000208776	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y4D2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ABCA13-005	OTTHUMT00000341968.2	463	155aa	OTTHUMP00000208778	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZI9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ABCA13-004	OTTHUMT00000341967.2	4275	1192aa	OTTHUMP00000208777	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C0U5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ABCA13-002	OTTHUMT00000341965.2	3528	317aa	OTTHUMP00000208775	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ABCA13-007	OTTHUMT00000476349.3	7250	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ABCA13-006	OTTHUMT00000341969.1	3340	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 463 bps Translation length: 155 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 20/11/2008)

Alternative symbols

AC091770.2-005

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 48,507,872-48,520,145 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000435451

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ABCA13-005 OTTHUMT00000341968.2

Summary

Transcript-based displays