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Description

serrate RNA effector molecule homolog (Arabidopsis)

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SRRT-002OTTHUMT00000347166.22964875aaOTTHUMP00000276011
 
Protein coding
CCDS47666-
SRRT-001OTTHUMT00000347165.32955872aaOTTHUMP00000276010
 
Protein coding
CCDS47665-
SRRT-004OTTHUMT00000347168.32905876aaOTTHUMP00000276014
 
Protein coding
CCDS34709Q9BXP5
SRRT-003OTTHUMT00000347167.32893871aaOTTHUMP00000276013
 
Protein coding
CCDS47667-
SRRT-016OTTHUMT00000347180.11607499aaOTTHUMP00000211339
 
Protein coding
-H7C3A1 CDS 5' incomplete
SRRT-018OTTHUMT00000347182.3397112aaOTTHUMP00000211341
 
Protein coding
--CDS 3' incomplete
SRRT-007OTTHUMT00000347171.32902No protein-
 
Artifact
--
SRRT-017OTTHUMT00000347181.2446148aaOTTHUMP00000211340
 
Non stop decay
--CDS 5' incomplete
SRRT-019OTTHUMT00000347183.172777aaOTTHUMP00000211342
 
Nonsense mediated decay
--CDS 5' incomplete
SRRT-006OTTHUMT00000347170.355650aaOTTHUMP00000276012
 
Nonsense mediated decay
--
SRRT-010OTTHUMT00000347174.144847aaOTTHUMP00000211338
 
Nonsense mediated decay
-H7C1K0 CDS 5' incomplete
SRRT-008OTTHUMT00000347172.1726No protein-
 
Retained intron
--
SRRT-014OTTHUMT00000347178.1655No protein-
 
Retained intron
--
SRRT-005OTTHUMT00000347169.2582No protein-
 
Retained intron
--
SRRT-009OTTHUMT00000347173.1575No protein-
 
Retained intron
--
SRRT-012OTTHUMT00000347176.1563No protein-
 
Retained intron
--
SRRT-015OTTHUMT00000347179.1540No protein-
 
Retained intron
--
SRRT-011OTTHUMT00000347175.1378No protein-
 
Retained intron
--
SRRT-013OTTHUMT00000347177.1376No protein-
 
Retained intron
--
Statistics

Exons: 5 Transcript length: 448 bps Translation length: 47 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 11/02/2009)

Alternative symbols

RP11-126L15.6-010

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 100,885,295-100,886,824 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays