Transcript: CLDN15-005 OTTHUMT00000347445.1

Description

claudin 15

Location

Chromosome 7: 101,232,405-101,237,477 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150512 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CLDN15-001	OTTHUMT00000318698.1	2131	228aa	OTTHUMP00000197704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5717	P56746
CLDN15-002	OTTHUMT00000318699.2	1370	228aa	OTTHUMP00000197705	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5717	P56746
CLDN15-007	OTTHUMT00000347447.2	691	170aa	OTTHUMP00000211473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JHQ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CLDN15-006	OTTHUMT00000347446.2	632	148aa	OTTHUMP00000211472	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J3Z2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CLDN15-005	OTTHUMT00000347445.1	832	106aa	OTTHUMP00000211471	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C2D7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CLDN15-004	OTTHUMT00000347444.1	646	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CLDN15-003	OTTHUMT00000318700.1	1200	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 832 bps Translation length: 106 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 13/02/2009)

Alternative symbols

AC006329.6-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 101,232,405-101,237,477 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000433833

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CLDN15-005 OTTHUMT00000347445.1

Summary

Transcript-based displays