Transcript: ALCAM-001 OTTHUMT00000353764.1

Description

activated leukocyte cell adhesion molecule

Location

Chromosome 3: 105,366,909-105,576,900 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 30 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159192 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ALCAM-001	OTTHUMT00000353764.1	4701	583aa	OTTHUMP00000214313	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33810	Q13740
ALCAM-002	OTTHUMT00000353765.2	4189	570aa	OTTHUMP00000214314	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58841	-
ALCAM-007	OTTHUMT00000353770.2	2496	344aa	OTTHUMP00000214316	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C543	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ALCAM-005	OTTHUMT00000353768.2	1818	532aa	OTTHUMP00000214315	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5GXJ9
ALCAM-004	OTTHUMT00000353767.1	1242	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ALCAM-008	OTTHUMT00000353771.1	564	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ALCAM-006	OTTHUMT00000353769.2	2845	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ALCAM-003	OTTHUMT00000353766.1	1770	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ALCAM-009	OTTHUMT00000353772.1	783	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 4,701 bps Translation length: 583 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33810

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 12/05/2009)

Alternative symbols

RP11-16N5.1-001

Other assemblies

This transcript maps to 105,366,909-105,576,900 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000306107

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ALCAM-001 OTTHUMT00000353764.1

Summary

Transcript-based displays