Transcript: PTPRD-008 OTTHUMT00000355538.2

Description

protein tyrosine phosphatase, receptor type, D

Location

Chromosome 9: 8,633,390-8,857,776 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000021005 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PTPRD-002	OTTHUMT00000055395.3	9911	1912aa	OTTHUMP00000022727	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43786	P23468
PTPRD-003	OTTHUMT00000355536.1	5039	1505aa	OTTHUMP00000215416	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6472	-
PTPRD-006	OTTHUMT00000055398.2	5038	1505aa	OTTHUMP00000215419	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55289	-
PTPRD-001	OTTHUMT00000055393.2	1697	202aa	OTTHUMP00000215418	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PTPRD-009	OTTHUMT00000490134.1	891	297aa	OTTHUMP00000282518	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GU15	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PTPRD-008	OTTHUMT00000355538.2	521	93aa	OTTHUMP00000215417	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPRD-005	OTTHUMT00000055397.1	1205	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPRD-004	OTTHUMT00000055396.2	420	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPRD-007	OTTHUMT00000355537.1	551	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 521 bps Translation length: 93 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 08/06/2009)

Alternative symbols

RP11-60C15.1-008

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 8,633,390-8,857,776 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000634771 ENST00000481079

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PTPRD-008 OTTHUMT00000355538.2

Summary

Transcript-based displays