Transcript: SLIT3-002 OTTHUMT00000371504.1

Description

slit homolog 3 (Drosophila)

Location

Chromosome 5: 168,666,225-169,300,782 reverse strand.

About this transcript

This transcript has 36 exons and is annotated with 175 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130409 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SLIT3-001	OTTHUMT00000252792.4	9706	1523aa	OTTHUMP00000160960	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4369	O75094
SLIT3-002	OTTHUMT00000371504.1	4895	1530aa	OTTHUMP00000223095	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS64311	-
SLIT3-005	OTTHUMT00000371507.1	2553	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLIT3-008	OTTHUMT00000376173.1	972	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLIT3-007	OTTHUMT00000371521.1	594	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SLIT3-004	OTTHUMT00000371506.1	4228	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLIT3-003	OTTHUMT00000371505.1	2090	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SLIT3-006	OTTHUMT00000371520.1	987	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 36 Transcript length: 4,895 bps Translation length: 1,530 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS64311

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 30/11/2009)

Alternative symbols

AC026689.2-002

Other assemblies

This transcript maps to 168,666,225-169,300,782 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000332966

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SLIT3-002 OTTHUMT00000371504.1

Summary

Transcript-based displays