Transcript: HMGXB3-001 OTTHUMT00000373771.1

Description

HMG box domain containing 3

Location

About this transcript

This transcript has 20 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
HMGXB3-001	OTTHUMT00000373771.1	4974	1292aa	OTTHUMP00000224091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54935
HMGXB3-002	OTTHUMT00000373770.1	5275	1260aa	OTTHUMP00000224090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
HMGXB3-004	OTTHUMT00000373772.1	975	112aa	OTTHUMP00000224092	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HMGXB3-003	OTTHUMT00000373773.1	749	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
HMGXB3-005	OTTHUMT00000373774.1	580	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 20 Transcript length: 4,974 bps Translation length: 1,292 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54935

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 08/01/2010)

Alternative symbols

AC011406.1-001

Other assemblies

This transcript maps to 150,000,718-150,052,823 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000502717

Curation Method

Manual annotation from Havana