Transcript: NIPAL4-005 OTTHUMT00000373793.1

Description

NIPA-like domain containing 4

Location

About this transcript

This transcript has 7 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NIPAL4-001	OTTHUMT00000373789.1	3274	466aa	OTTHUMP00000224097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47328	Q0D2K0
NIPAL4-002	OTTHUMT00000373790.1	1600	447aa	OTTHUMP00000224098	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54944	-
NIPAL4-004	OTTHUMT00000373792.1	883	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
NIPAL4-005	OTTHUMT00000373793.1	788	132aa	OTTHUMP00000224099	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
NIPAL4-003	OTTHUMT00000373791.1	1151	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NIPAL4-006	OTTHUMT00000373794.1	567	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 7 Transcript length: 788 bps Translation length: 132 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 08/01/2010)

Alternative symbols

CTB-47B11.4-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 157,460,255-157,472,435 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000519150

Curation Method

Manual annotation from Havana