Transcript: LYN-006 OTTHUMT00000378159.2

Description

v-yes-1 Yamaguchi sarcoma viral related oncogene homolog

Location

About this transcript

This transcript has 6 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LYN-003	OTTHUMT00000378158.3	5808	491aa	OTTHUMP00000226394	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47859	-
LYN-002	OTTHUMT00000378155.1	2297	512aa	OTTHUMP00000226393	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6162	P07948
LYN-006	OTTHUMT00000378159.2	550	150aa	OTTHUMP00000226395	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LYN-005	OTTHUMT00000378157.1	1751	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LYN-004	OTTHUMT00000378156.1	1704	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LYN-001	OTTHUMT00000103163.1	561	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 550 bps Translation length: 150 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 05/03/2010)

Alternative symbols

AC046176.1-006

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 55,940,234-55,950,748 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000520050

Curation Method

Manual annotation from Havana