Transcript: TNFRSF11B-001 OTTHUMT00000381220.1

Description

tumor necrosis factor receptor superfamily, member 11b

Location

Chromosome 8: 118,923,557-118,952,200 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 34 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000164969 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
TNFRSF11B-001	OTTHUMT00000381220.1	2402	401aa	OTTHUMP00000228056	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6326	O00300
TNFRSF11B-002	OTTHUMT00000381222.1	1144	145aa	OTTHUMP00000228057	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TNFRSF11B-003	OTTHUMT00000381221.1	849	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,402 bps Translation length: 401 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6326

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 07/04/2010)

Alternative symbols

KB-1187A6.1-001

Remarks

Note that there is a further upstream ATG, approx. 30 AA residues upstream from the current TSS. However, this has relatively poor kozak sequence, but does show conservation amongst other spp

Other assemblies

This transcript maps to 118,923,557-118,952,200 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000297350

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TNFRSF11B-001 OTTHUMT00000381220.1

Summary

Transcript-based displays